CONN toolbox references (general):


Sample of recent articles using the CONN toolbox: [1]

2010

    • Susan Whitfield-Gabrieli, Joseph M. Moran, Alfonso Nieto-Castañón, Christina Triantafyllou, Rebecca Saxe and John D.E. Gabrieli. (2010) Associations and dissociations between default and self-reference networks in the human brain. Neuroimage 55(1):225-2 
    • Christopher Benjamin, Daniel A. Lieberman, Maria Chang, Noa Ofen, Sue Whitfield-Gabrieli, John D. E. Gabrieli, and Nadine Gaab. (2010) The Influence of Rest Period Instructions on the Default Mode Network. Frontiers in Human Neuroscience 4(218)

2011

          Bedny M., Pascual-Leone A., Dodell-Feder D., Fedorenko E., Saxe R. (2011) Language processing in the occipital cortex of congenitally blind adults. PNAS 108: 4429-4434
        • Turken A.U., & Dronkers N.F. (2011) The Neural Architecture of the Language Comprehension Network: Converging Evidence from Lesion and Connectivity Analyses. Front Syst Neurosci. 2011; 5: 1.
        • Woodward N.D., Rogers B., Heckers S. (2011) Functional resting-state networks are differentially affected in schizophrenia. Schizophrenia Research.130: 86-93
        • Chai, X.J., Whitfield-Gabrieli, S., Nieto-Castañón, A., Gabrieli, D.J., McCarthy, J.M., Cohen, B.M., Shinn A.K., Öngür, D. (2011). Abnormal ventral and dorsal lateral prefrontal resting-state connectivity patterns in bipolar disorder and schizophrenia. Neuropsychopharmacology. doi: 10.1038/npp.2011.88 
        • Slobounov S.M., Gaya M., Zhang K., Johnson B., Pennell D., Sebastianelli W., Horovitz S., and Hallett M. (2011) Alteration of brain functional network at rest and in response to YMCA physical stress test in concussed athletes: RsFMRI study. NeuroImage. 55: 1716-1727
        • Chanraud S., Pitel AL., Pfefferbaum A. & Sullivan E.V. (2011) Disruption of Functional Connectivity of the Default-Mode Network in Alcoholism. Cereb. Cortex doi: 10.1093/cercor/bhq297
        • Pfefferbaum A., Chanraud S., Pitel AL., Müller-Oehring E., Shankaranarayanan A., Alsop D.C., Rohlfing T., Sullivan E.V. (2011) Cerebral Blood Flow in Posterior Cortical Nodes of the Default Mode Network Decreases with Task Engagement but Remains Higher than in Most Brain Regions. Cereb. Cortex 21: 233-244.
        • Kilpatrick L.A., Suyenobu B.Y., Smith S.R., Bueller J.A., Goodman T., Creswell J.D., Tillisch K., Mayer E.M., Naliboff B.D.(2011) Impact of mindfulness-based stress reduction training on intrinsic brain connectivity. NeuroImage 56 :290-298
        • S. Arnold, S. Whitfield-Gabrieli, S. Shannon, J. D. Gabrieli, and C. Triantafyllou. (2011) Improved detection of functional connectivity MRI with 32-channel phased array head coil. Proc. Intl. Soc. Mag. Reson. Med. 19.
        • Fernández-Seara M.A., Aznárez-Sanado M., Mengual E., Irigoyen J., Heukamp F., Pastor M.A. (2011) Effects on resting cerebral blood flow and functional connectivity induced by metoclopramide: a perfusion MRI study in healthy volunteers. British Journal of Pharmacology 163: 1639–1652
        • Eric Ichesco, Andres Quintero, Daniel J. Clauw, Scott Peltier, Pia M. Sundgren, Geoffrey E. Gerstner, Tobias Schmidt-Wilcke (2011). Altered Functional Connectivity Between the Insula and the Cingulate Cortex in Patients With Temporomandibular Disorder: A Pilot Study. Headache(52):441-454
        • Fiery Cushman, Dylan Murray, Shauna Gordon-McKeon, Sophie Wharton and Joshua D. Greene (2011). Judgment before principle: engagement of the frontoparietal control network in condemning harms of omission. Social Cognitive and Affective Neuroscience. doi: 10.1093/scan/nsr072
        • Wolbers T., Klatzky R.L., Loomis J.M., Wutte M.G., Giudice N.A. (2011) Modality-Independent Coding of Spatial Layout in the Human Brain. Current Biology 21: 2011
        • Brian Johnson, Kai Zhang, Michael Gay, Silvina Horovitz, Mark Hallett, Wayne Sebastianelli and Semyon Slobounov (2011, in press). Alteration of brain default network in subacute phase of injury in concussed individuals: Resting-state fMRI study. Neuroimage
        • Jennifer M. Glass, David A. Williams, Maria-Luisa Fernandez-Sanchez, Anson Kairys, Paloma Barjola, Mary M. Heitzeg, Daniel J. Clauw, Tobias Schmidt-Wilcke  (2011, in press). Executive Function in Chronic Pain Patients and Healthy Controls: Different Cortical Activation During Response Inhibition in Fibromyalgia. The Journal of Pain
        • Tilman Schulte, Eva M. Müller-Oehring, Edith V. Sullivan, Adolf Pfefferbaum (2011, in press). Synchrony of Corticostriatal-Midbrain Activation Enables Normal Inhibitory Control and Conflict Processing in Recovering Alcoholic Men. Biological Psychiatry
        • Sandra Chanraud, Anne-Lise Pitel, Eva M. Müller-Oehring, Adolf Pfefferbaum and Edith V. Sullivan (2012, in press). Remapping the Brain to Compensate for Impairment in Recovering Alcoholics. Cerebral Cortex
        • And U. Turken and Nina F. Dronkers. (2011). The neural architecture of the language comprehension network: converging evidence from lesion and connectivity analyses. Frontiers in Systems Neuroscience 5

      2012

          • Stern ER, Fitzgerald KD, Welsh RC, Abelson JL, Taylor SF. (2012). Resting-State Functional Connectivity between Fronto-Parietal and Default Mode Networks in Obsessive-Compulsive Disorder. PLoS ONE 7(5): e36356. doi:10.1371/journal.pone.0036356
          • Anne-Lise Pitel, Sandra Chanraud, Eva M. Müller-Oehring, Adolf Pfefferbaum and Edith V. Sullivan  (2012). Modulation of limbic-cerebellar functional connectivity enables alcoholics to recognize who is who. Brain Structure and Function. doi: 10.1007/s00429-012-0421-6
          • Redcay Elizabeth, Kleiner Mario, Saxe Rebecca (2012). Look at this: the neural correlates of initiating and responding to bids for joint attention. Frontiers in Human Neuroscience 6:169. doi: 10.3389/fnhum.2012.00169
          • Heather Kenna, Fumiko Hoeft, Ryan Kelley, Tonita Wroolie, Bevin DeMuth, Allan Reiss, Natalie Rasgon (2012, in press). Fasting plasma insulin and the default mode network in women at risk for Alzheimer’s disease. Neurobiology of aging
          • Marta Pecina, Brian J. Mickey, Tiffany Love, Heng Wang, Scott A. Langenecker, Colin Hodgkinson, Pei-Hong Shen, Sandra Villafuerte, David Hsu, Sara L. Weisenbach, Christian S. Stohler, David Goldman and Jon-Kar Zubieta (2012, in press). DRD2 polymorphisms modulate reward and emotion processing, dopamine neurotransmission and openness to experience. Cortex
          • Keiichi Onoda, Masaki Ishihara, and Shuhei Yamaguchi (2012). Decreased Functional Connectivity by Aging Is Associated with Cognitive Decline. Journal of Cognitive Neuroscience. doi:10.1162/jocn_a_00269
          • Albert R. Powers III, Matthew A. Hevey, and Mark T. Wallace (2012). Neural correlates of multisensory perceptual learning. The Journal of Neuroscience, 32(18):6263-6274
          • Hosseini SMH, Hoeft F, Kesler SR (2012) GAT: A Graph-Theoretical Analysis Toolbox for Analyzing Between-Group Differences in Large-Scale Structural and Functional Brain Networks. PLoS ONE 7(7): e40709. doi:10.1371/journal.pone.0040709
          • Shumskaya, Elena; Andriessen, Teuntje; Norris, David G.; Vos, Pieter E. (2012). Abnormal whole-brain functional networks in homogeneous acute mild traumatic brain injury. Neurology. 79(2):175-182
          • Ji-young Kim, Yee-hyuk Kim, Sangheun Lee, Jee-Hye Seo, Hi-Jin Song, Jin Ho Cho & Yongmin Chang, (2012). Alteration of functional connectivity in tinnitus brain revealed by resting-state fMRI?: A pilot study. International Journal of Audiology 51(5):413-417
          • Jennifer Bruno, S.M. Hadi Hosseini, Shelli Kesler (2012). Altered resting state functional brain network topology in chemotherapy-treated breast cancer survivors. Neuroimage. doi:10.1016/j.nbd.2012.07.009
          • Frank S, Lee S, Preissl H, Schultes B, Birbaumer N, et al. (2012). The Obese Brain Athlete: Self-Regulation of the Anterior Insula in Adiposity. PLoS ONE 7(8): e42570. doi:10.1371/journal.pone.0042570
          • Xin Di, Senhua Zhu, Hua Jin, Pin Wang, Zhuoer Ye, Ke Zhou, Yan Zhuo, and Hengyi Rao. (2012). Altered resting brain function and structure in professional badminton players. Brain Connectivity. doi:10.1089/brain.2011.0050
          • Joseph I. Tracy, Karol Osipowicz, Philip Spechler, Ashwini Sharan, Christopher Skidmore, Gaelle Doucet, Michael R. Sperling. (2012). Functional connectivity evidence of cortico–cortico inhibition in temporal lobe epilepsy. Human Brain Mapping. doi: 10.1002/hbm.22181
          • Neil D. Woodward, Haleh Karbasforoushan, Stephan Heckers (2012). Thalamocortical Dysconnectivity in Schizophrenia. The American Journal of Psychiatry, 169(10):1092-1099
          • Killgore, William; Schwab, Zachary J.; Weiner, Melissa R. (2012). Self-reported nocturnal sleep duration is associated with next-day resting state functional connectivity. Neuroreport 23(13):741–745
          • Kai Zhang, Brian Johnson, Michael Gay, Silvina G. Horovitz, Mark Hallett, Wayne Sebastianelli, and Semyon Slobounov (2012). Default Mode Network in Concussed Individuals in Response to the YMCA Physical Stress Test. Journal of Neurotrauma. 29(5): 756-765. doi:10.1089/neu.2011.2125.
          • Tanabe Hiroki C, Kosaka Hirotaka, Saito Daisuke N, Koike Takahiko, Hayashi Masamichi J, Izuma Keise, Komeda Hidetsugu, Ishitobi Makoto, Omori Masao, Munesue Toshio, Okazawa Hidehiko, Wada Yuji, Sadato Norihiro (2012). Hard to “tune in”: neural mechanisms of live face-to-face interaction with high-functioning autistic spectrum disorder. Frontiers in Human Neuroscience. 27. doi: 10.3389/fnhum.2012.00268
          • Koçak, O.M., Kale, E., Çiçek, M. (2012). Default mode network connectivity differences in obsessive-compulsive disorder. Activitas Nervosa Superior 54(3-4):118-124.

        2013

            • Vuontela, V., Jiang, P., Tokariev, M., Savolainen, P., Ma, Y., Aronen, E.T., Fontell, T., Liiri, T., Ahlström, M., Salonen, O., Carlson, S. (2013). Regulation of brain activity in the fusiform face and parahippocampal place areas in 7–11-year-old children. Brain and Cognition, 81(2):203-214. ISSN 0278-2626, 10.1016/j.bandc.2012.11.003.
            • Young-Chul Jung, Tilman Schulte, Eva M. Müller-Oehring, William Hawkes, Kee Namkoong, Adolf Pfefferbaum, and Edith V. Sullivan. (2013). Synchrony of Anterior Cingulate Cortex and Insular-Striatal Activation Predicts Ambiguity Aversion in Individuals with Low Impulsivity. Cerebral Cortex. doi:10.1093/cercor/bht008
            • Torrisi, S., Moody, T. D., Vizueta, N., Thomason, M. E., Monti, M. M., Townsend, J. D., Bookheimer, S. Y. and Altshuler, L. L. (2013). Differences in resting corticolimbic functional connectivity in bipolar I euthymia. Bipolar Disorders. doi: 10.1111/bdi.12047
            • McCormick, C., Quraan, M., Cohn, M., Valiante, T. A. and McAndrews, M. P. (2013). Default mode network connectivity indicates episodic memory capacity in mesial temporal lobe epilepsy. Epilepsia. doi: 10.1111/epi.12098
            • Posner J, Hellerstein DJ, Gat I, et al. Antidepressants Normalize the Default Mode Network in Patients With Dysthymia. (2013). JAMA Psychiatry:1-10. doi:10.1001/jamapsychiatry.2013.455.
            • Motomura Y, Kitamura S, Oba K, Terasawa Y, Enomoto M, et al. (2013) Sleep Debt Elicits Negative Emotional Reaction through Diminished Amygdala-Anterior Cingulate Functional Connectivity. PLoS ONE 8(2): e56578. doi:10.1371/journal.pone.0056578
            • A. Quintero, E. Ichesco, R. Schutt, C. Myers, S. Peltier, and G.E. Gerstner (2013). Functional Connectivity of Human Chewing: An fcMRI Study. Journal of Dental Research. doi:10.1177/0022034512472681.
            • Hoekzema, E., Carmona, S., Ramos-Quiroga, J. A., Richarte Fernández, V., Bosch, R., Soliva, J. C., Rovira, M., Bulbena, A., Tobeña, A., Casas, M. and Vilarroya, O. (2013), An independent components and functional connectivity analysis of resting state fMRI data points to neural network dysregulation in adult ADHD. Human Brain Mapping. doi: 10.1002/hbm.22250
            • William R. Marchand, James N. Lee, Susanna Johnson, Phillip Gale, John Thatcher, (2013). Differences in functional connectivity in major depression versus bipolar II depression, Journal of Affective Disorders, doi:10.1016/j.jad.2013.01.028.
            • Kleber, B., Zeitouni, A.G., Friberg, A., Zatorre, R.J. (2013). Experience-Dependent Modulation of Feedback Integration during Singing: Role of the Right Anterior Insula. The Journal of Neuroscience, 33(14): 6070-6080; doi: 10.1523/J NEUROSCI.4418-12.2013
            • Achard, S.; Bunke, H.; Van De Ville, D. (2013). Machine Learning with Brain Graphs: Predictive Modeling Approaches for Functional Imaging in Systems Neuroscience. Signal Processing Magazine, IEEE. 30(3):58-70.
            • Sullivan, E.V., Müller-Oehring. E., Pitel, A.L., Chanraud. S., Shankaranarayanan. A., Alsop, D.C., Rohlfing. T., Pfefferbaum. A. (2013), A Selective Insular Perfusion Deficit Contributes to Compromised Salience Network Connectivity in Recovering Alcoholic Men, Biological Psychiatry, doi:10.1016/j.biopsych.2013.02.026.
            • Manglore S, Bharath RD, Panda R, George L, Thamodharan A, Gupta AK. (2013) Utility of resting fMRI and connectivity in patients with brain tumor. Neurol India 61:144-51
            • Posner, J., Rauh, V., Gruber, A., Gat, I., Wang, Z., Peterson, B.S., (2013) Dissociable attentional and affective circuits in medication-naïve children with attention-deficit/hyperactivity disorder. Psychiatry Research: Neuroimaging, ISSN 0925-4927, 10.1016/j.pscychresns.2013.01.004.
            • Moriah E. Thomason, Maria A. Tocco, Kelly A. Quednau, Andrea R. Bedway, Justin M. Carré, (2013). Idle Behaviors of the Hippocampus Reflect Endogenous Cortisol Levels in Youth. Journal of the American Academy of Child & Adolescent Psychiatry. ISSN 0890-8567, 10.1016/j.jaac.2013.04.004.
            • Killgore, William D.S.; Schwab, Zachary J.; Kipman, Maia; DelDonno, Sophie R.; Weber, Mareen (2013). Insomnia-related complaints correlate with functional connectivity between sensory–motor regions. Neuroreport. 24(5):233-240.
            • Arnold Anteraper S, Whitfield-Gabrieli S, Keil B, Shannon S, Gabrieli JD, Triantafyllou C. (2013) Exploring Functional Connectivity Networks with Multi-Channel Brain Array Coils. Brain Connectivity. doi:10.1089/brain.2012.0113.
            • Thomason ME, Dassanayake MT, Shen S, Katkuri Y, Alexis M, Anderson AL, Yeo L, Mody S, Hernandez-Andrade E, Hassan SS, Studholme C, Jeong JW, Romero R. (2013) Cross-hemispheric functional connectivity in the human fetal brain. Sci Transl Med 5(173):173ra24.
            • Shine, J. M., Halliday, G. M., Gilat, M., Matar, E., Bolitho, S. J., Carlos, M., Naismith, S. L. and Lewis, S. J.G. (2013), The role of dysfunctional attentional control networks in visual misperceptions in Parkinson's disease. Hum. Brain Mapp. doi: 10.1002/hbm.22321
            • Pengxu, W., & Ruixue, B. (2013, in press). The role of insula-associated brain network in touch. BioMed Research International.
            • Shelli R. Kesler, Jeffrey S. Wefel, S. M. Hadi Hosseini, Maria Cheung, Christa L. Watson, and Fumiko Hoeft (2013). Default mode network connectivity distinguishes chemotherapy-treated breast cancer survivors from controls. PNAS 2013 : 1214551110v1-201214551.
            • Paul G. Unschuld, Xinyang Liu, Megan Shanahan, Russell L. Margolis, Susan S. Bassett, Jason Brandt, David J. Schretlen, Graham W. Redgrave, Jun Hua, Christoph Hock, Sarah A. Reading, Peter C.M. van Zijl, James J. Pekar, Christopher A. Ross (2013). Prefrontal executive function associated coupling relates to Huntington's disease stage. Cortex, doi:10.1016/j.cortex.2013.05.015 
            • Müller-Oehring, E.M., Jung, Y.C., Sullivan, E.V., Hawkes, W.C., Pfefferbaum, A., Schulte, T. (2013). Midbrain-Driven Emotion and Reward Processing in Alcoholism. Neuropsychopharmacology. doi:10.1038/npp.2013.102.
            • Hosseini, S.M.H. , Kesler, S.R. (2013). Comparing connectivity pattern and small-world organization between structural correlation and resting-state networks in healthy adults. NeuroImage, 78:402–414.
            • Stevens, J.S., Jovanovic, T., Fani, N., Ely, T.D, Glover, E.M., Bradley, B., Ressler, K.J. (2013). Disrupted amygdala-prefrontal functional connectivity in civilian women with posttraumatic stress disorder. Journal of Psychiatric Research doi:10.1016/j.jpsychires.2013.05.031.
            • Porges, E.C., and Decety, J. (2013). Violence as a source of pleasure or displeasure is associated with specific functional connectivity with the nucleus accumbens. Front. Hum. Neurosci., doi: 10.3389/fnhum.2013.00447.
            • Delmonte, S., Gallagher, L., O’Hanlon, E., McGrath, J., Balsters, J.H. (2013). Functional and structural connectivity of frontostriatal circuitry in Autism Spectrum Disorder. Front. Hum. Neurosci. 7:430
            • Quidé, Y., Morris, R.W., Shepherd, A.M., Rowland, J.E., Green, M.J. (2013). Task-related fronto-striatal functional connectivity during working memory performance in schizophrenia. Schizophrenia Research, doi:10.1016/j.schres.2013.08.009
            • Arnold, A.E.G.F., Protzner, A.B., Bray, S., Levy, R.M., Iaria, G. (2013). Neural Network Configuration and Efficiency Underlies Individual Differences in Spatial Orientation Ability. Journal of Cognitive Neuroscience. doi:10.1162/jocn_a_00491
            • Shenas, S.K.; Halici, U.; Cicek, M. (2013). Detection of obsessive compulsive disorder using resting-state functional connectivity data. Biomedical Engineering and Informatics 132:136. doi: 10.1109/BMEI.2013.6746921
            • Delmonte S, Gallagher L, O'Hanlon E, McGrath J, Balsters JH (2013). Functional and structural connectivity of frontostriatal circuitry in Autism Spectrum Disorder. Front Hum Neurosci. 7:430. doi:10.3389/fnhum.2013.00430
            • William R. Marchand, James N. Lee, Susanna Johnson, John Thatcher, Phillip Gale (2014). Striatal circuit function is associated with prior self-harm in remitted major depression. Neuroscience Letters, 557B:154-158. doi:10.1016/j.neulet.2013.10.053
            • Volker Dietz, Gianluca Macauda, Miriam Schrafl-Altermatt, Markus Wirz, Evelyne Kloter and Lars Michels (2013). Neural Coupling of Cooperative Hand Movements: A Reflex and fMRI Study. Cerebral Cortex. doi: 10.1093/cercor/bht285
            • Schmidt SA, Akrofi K, Carpenter-Thompson JR, Husain FT (2013) Default Mode, Dorsal Attention and Auditory Resting State Networks Exhibit Differential Functional Connectivity in Tinnitus and Hearing Loss. PLoS ONE 8(10): e76488. doi: 10.1371/journal.pone.0076488
            • Roger Newman-Norlund, Jessica Burch, Katie Becofsky (2013). Human Mirror Neuron System (hMNS) Specific Differences in Resting-State Functional Connectivity in Self-Reported Democrats and Republicans: A Pilot Study. Journal of Behavioral and Brain Science, 2013(3):341-349. doi:10.4236/jbbs.2013.34034

          2014

              • Posner, J., Marsh, R., Maia, T. V., Peterson, B. S., Gruber, A. and Simpson, H. B. (2014), Reduced functional connectivity within the limbic cortico-striato-thalamo-cortical loop in unmedicated adults with obsessive-compulsive disorder. Human Brain Mapping 35:2852–2860. doi:10.1002/hbm.22371
              • Suzanne N. Avery, Jacqueline A. Clauss, Danny G. Winder, Neil Woodward, Stephan Heckers, Jennifer Urbano Blackford (2014). NST neurocircuitry in humans. NeuroImage. May 2014, Vol. 91: 311-323
              • P. G. Unschuld, A. S. Buchholz, M. Varvaris, P. C. M. van Zijl, C. A. Ross, J. J. Pekar, C. Hock, J. A. Sweeney, C. A. Tamminga, M. S. Keshavan, G. D. Pearlson, G. K. Thaker, D. J. Schretlen  (2014). Prefrontal Brain Network Connectivity Indicates Degree of Both Schizophrenia Risk and Cognitive Dysfunction. Schizophrenia Bulletin. May 2014, Vol. 40, No. 3: 653-664
              • Rajanikant Panda, Rose Dawn Bharath, Lija George, Silpa Kanungo, Rajakumari P. Reddy, Neeraj Upadhyay, Arumugam Thamodharan, Jamuna Rajeshwaran, Shobini L. Rao, Arun Kumar Gupta (2014). Unraveling Brain Functional Connectivity of encoding and retrieval in the context of education. Brain and Cognition. Apr 2014, Vol. 86: 75-81
              • Stefanie C. Steininger, Xinyang Liu, Anton Gietl, Michael Wyss, Simon Schreiner, Esmeralda Gruber, Valerie Treyer, Andrea Kälin, Sandra Leh, Alfred Buck, Roger M. Nitsch, Klaas P. Prüssmann, Christoph Hock, Paul G. Unschuld (2014). Cortical Amyloid Beta in Cognitively Normal Elderly Adults is Associated with Decreased Network Efficiency within the Cerebro-Cerebellar System. Frontiers in Aging Neuroscience. Mar 2014, Vol. 6
              • J. M. Ford, V. A. Palzes, B. J. Roach, S. G. Potkin, T. G. M. van Erp, J. A. Turner, B. A. Mueller, V. D. Calhoun, J. Voyvodic, A. Belger, J. Bustillo, J. G. Vaidya, A. Preda, S. C. McEwen, D. H. Mathalon (2014). Visual Hallucinations Are Associated With Hyperconnectivity Between the Amygdala and Visual Cortex in People With a Diagnosis of Schizophrenia. Schizophrenia Bulletin. Mar 2014
              • Dodhia, S., Hosanagar, A., Fitzgerald, D. A., Labuschagne, I., Wood, A. G., Nathan, P. J., & Phan, K. L. (2014). Modulation of resting-state amygdala-frontal functional connectivity by oxytocin in generalized social anxiety disorder.Neuropsychopharmacology39(9), 2061-2069.
              • Xiaoqian J. Chai, Noa Ofen, John D. E. Gabrieli, Susan Whitfield-Gabrieli (2014). Selective Development of Anticorrelated Networks in the Intrinsic Functional Organization of the Human Brain. Journal of Cognitive Neuroscience. Mar 2014, Vol. 26, No. 3: 501-513
              • Alexander Barnett, Jeremy Marty-Dugas, Mary Pat McAndrews . Advantages of sentence-level fMRI language tasks in presurgical language mapping for temporal lobe epilepsy. Epilepsy & Behavior. Mar 2014, Vol. 32: 114-120
              • Shelli R. Kesler, Meike Gugel, Mika Pritchard-Berman, Clement Lee, Emily Kutner, S.M. Hadi Hosseini, Gary Dahl, Norman Lacayo  (2014). Altered resting state functional connectivity in young survivors of acute lymphoblastic leukemia. Pediatric Blood & Cancer. Mar 2014
              • Sheeba Arnold Anteraper, Christina Triantafyllou, Alice T. Sawyer, Stefan G. Hofmann, John D. Gabrieli, Susan Whitfield-Gabrieli  (2014). Hyper-Connectivity of Subcortical Resting-State Networks in Social Anxiety Disorder. Brain Connectivity. Mar 2014, Vol. 4, No. 2: 81-90
              • John Muschelli, Mary Beth Nebel, Brian S. Caffo, Anita D. Barber, James J. Pekar, Stewart H. Mostofsky  (2014). Reduction of motion-related artifacts in resting state fMRI using aCompCor. NeuroImage. Mar 2014
              • J. S. Stevens, L. M. Almli, N. Fani, D. A. Gutman, B. Bradley, S. D. Norrholm, E. Reiser, T. D. Ely, R. Dhanani, E. M. Glover, T. Jovanovic, K. J. Ressler (2014). PACAP receptor gene polymorphism impacts fear responses in the amygdala and hippocampus. Proceedings of the National Academy of Sciences. Feb 2014, Vol. 111, No. 8: 3158-3163
              • Chandler Sours, Joseph Rosenberg, Robert Kane, Steve Roys, Jiachen Zhuo, Kathirkamanthan Shanmuganathan, Rao P. Gullapalli (2014). Associations between interhemispheric functional connectivity and the Automated Neuropsychological Assessment Metrics (ANAM) in civilian mild TBI. Brain Imaging and Behavior. Feb 2014
              • Kathleen A. Garrison, Dustin Scheinost, R. Todd Constable, Judson A. Brewer (2014). BOLD signal and functional connectivity associated with loving kindness meditation. Brain and Behavior. Feb 2014
              • Jennifer Urbano Blackford, Jacqueline A. Clauss, Suzanne N. Avery, Ronald L. Cowan, Margaret M. Benningfield, Ross M. VanDerKlok (2014). Amygdala–cingulate intrinsic connectivity is associated with degree of social inhibition. Biological Psychology. Feb 2014
              • S. Ionta, R. Martuzzi, R. Salomon, O. Blanke  (2014). The Brain Network reflecting Bodily Self-Consciousness: a functional connectivity study. Social Cognitive and Affective Neuroscience. Jan 2014
              • Joseph M. Orr, Jessica A. Turner, Vijay A. Mittal  (2014). Widespread brain dysconnectivity associated with psychotic-like experiences in the general population. NeuroImage: Clinical. Jan 2014, Vol. 4: 343-351
              • Cameron J. Dunn, Shantel L Duffy, Ian B Hickie, Jim Lagopoulos, Simon J.G. Lewis, Sharon L. Naismith, James M. Shine  (2014). Deficits in episodic memory retrieval reveal impaired default mode network connectivity in amnestic mild cognitive impairment. NeuroImage: Clinical. Jan 2014, Vol. 4: 473-480
              • Jessica A. Bernard, Derek J. Dean, Jerillyn S. Kent, Joseph M. Orr, Andrea Pelletier-Baldelli, Jessica R. Lunsford-Avery, Tina Gupta, Vijay A. Mittal  (2014). Cerebellar networks in individuals at ultra high-risk of psychosis: Impact on postural sway and symptom severity. Human Brain Mapping. Jan 2014
              • Takashi Itahashi, Takashi Yamada, Hiromi Watanabe, Motoaki Nakamura, Daiki Jimbo, Seiji Shioda, Kazuo Toriizuka, Nobumasa Kato, Ryuichiro Hashimoto (2014). Altered Network Topologies and Hub Organization in Adults with Autism: A Resting-State fMRI Study. PLoS ONE. doi: 10.1371/journal.pone.0094115
              • Christian Dresel, Yong Li, Verena Wilzeck, Florian Castrop, Claus Zimmer, Bernhard Haslinger (2014). Multiple changes of functional connectivity between sensorimotor areas in focal hand dystoni. J Neurol Neurosurg Psychiatry. doi:10.1136/jnnp-2013-307127
              • Jiook Cha ( 지욱), Tsafrir Greenberg, Joshua M. Carlson, Daniel J. DeDora, Greg Hajcak, and Lilianne R. Mujica-Parodi (2014). Circuit-Wide Structural and Functional Measures Predict Ventromedial Prefrontal Cortex Fear Generalization: Implications for Generalized Anxiety Disorder. The Journal of Neuroscience, 34(11):4043-4053; doi:10.1523/JNEUROSCI.3372-13.2014
              • William R. Marchand, James N. Lee, Susanna Johnson, Phillip Gale, John Thatcher, (2014). Abnormal functional connectivity of the medial cortex in euthymic bipolar II disorder. Progress in Neuro-Psychopharmacology and Biological Psychiatry, 51(3):28-33. doi:10.1016/j.pnpbp.2014.01.004
              • Suzanne N. Avery, Jacqueline A. Clauss, Danny G. Winder, Neil Woodward, Stephan Heckers, Jennifer Urbano Blackford, (2014). BNST neurocircuitry in humans. NeuroImage, 91(1):311-323. doi:10.1016/j.neuroimage.2014.01.017.
              • Gang Wang, Nathalie Erpelding, Karen D. Davis, (2014). Sex differences in connectivity of the subgenual anterior cingulate cortex. PAIN® 155(4):755-763. doi:10.1016/j.pain.2014.01.005
              • E. Abela MD, C. Rummel, M. Hauf, C. Weisstanner, K. Schindler, R. Wiest (2014). Neuroimaging of Epilepsy: Lesions, Networks, Oscillations. Clinical Neuroradiology 24(1):5-15
              • Seojung Lee, Kyung Ran Kim, Jeonghun Ku, Jung-Hyun Lee, Kee Namkoong, Young-Chul Jung, (2014). Resting-state synchrony between anterior cingulate cortex and precuneus relates to body shape concern in anorexia nervosa and bulimia nervosa. Psychiatry Research: Neuroimaging 221(1):43-48. doi:10.1016/j.pscychresns.2013.11.004 
              • Tadayonnejad R, Yang S, Kumar A, Ajilore O (2014) Multimodal Brain Connectivity Analysis in Unmedicated Late-Life Depression. PLoS ONE 9(4): e96033. doi:10.1371/journal.pone.0096033
              • David Dodell-Feder, Lynn E. DeLisi, Christine I. Hooker (2014). The relationship between default mode network connectivity and social functioning in individuals at familial high-risk for schizophrenia. Schizophrenia Research, doi:10.1016/j.schres.2014.03.031
              • Thomason ME, Brown JA, Dassanayake MT, Shastri R, Marusak HA, et al. (2014) Intrinsic Functional Brain Architecture Derived from Graph Theoretical Analysis in the Human Fetus. PLoS ONE 9(5): e94423. doi: 10.1371/journal.pone.0094423
              • Pauline Favre, Monica Baciu, Cédric Pichat, Thierry Bougerol, Mircea Polosan (2014). MRI evidence for abnormal resting-state functional connectivity in euthymic bipolar patients. Journal of Affective Disorders, doi:10.1016/j.jad.2014.04.054
              • E. Ichesco, T. Schmidt-Wilcke, R. Bhavsar, D.J. Clauw, S.J. Peltier, J. Kim, V. Napadow, J.P. Hampson, A.E. Kairys, D.A. Williams, R.E. Harris (2014). Altered resting state connectivity of the insular cortex in individuals with fibromyalgia. The Journal of Pain, doi: 10.1016/j.jpain.2014.04.007.
              • Fernanda Tovar-Moll, Myriam Monteiro, Juliana Andrade, Ivanei E. Bramati, Rodrigo Vianna-Barbosa, Theo Marins, Erika Rodrigues, Natalia Dantas, Timothy E. J. Behrens, Ricardo de Oliveira-Souza, Jorge Moll, and Roberto Lent, (2014). Structural and functional brain rewiring clarifies preserved interhemispheric transfer in humans born without the corpus callosum. PNAS, doi:10.1073/pnas.1400806111
              • Fransson, P., Flodin, P., Seimyr, G. Ö., & Pansell, T. (2014). Slow fluctuations in eye position and resting‐state functional magnetic resonance imaging brain activity during visual fixation. European Journal of Neuroscience40(12), 3828-3835.
              • Komeda, H., Kosaka, H., Saito, D. N., Mano, Y., Jung, M., Fujii, T., ... & Okazawa, H. (2014). Autistic empathy toward autistic others. Social cognitive and affective neuroscience, nsu126.
              • Hong, J. Y., Kilpatrick, L. A., Labus, J. S., Gupta, A., Katibian, D., Ashe-McNalley, C., ... & Mayer, E. A. (2014). Sex and disease-related alterations of anterior insula functional connectivity in chronic abdominal pain. The Journal of Neuroscience34(43), 14252-14259.
              • Jiang, P., Tokariev, M., Aronen, E. T., Salonen, O., Ma, Y., Vuontela, V., & Carlson, S. (2014). Responsiveness and functional connectivity of the scene-sensitive retrosplenial complex in 7–11-year-old children. Brain and cognition,92, 61-72.
              • Balleine, B. W., Morris, R. W., & Leung, B. K. (2014). Thalamocortical integration of instrumental learning and performance and their disintegration in addiction. Brain research.
              • Kirsch, V., Keeser, D., Hergenroeder, T., Erat, O., Ertl-Wagner, B., Brandt, T., & Dieterich, M. (2014). Structural and functional connectivity mapping of the vestibular circuitry from human brainstem to cortex. Brain Structure and Function, 1-18.
              • Sforazzini, F., Schwarz, A. J., Galbusera, A., Bifone, A., & Gozzi, A. (2014). Distributed BOLD and CBV-weighted resting-state networks in the mouse brain.Neuroimage87, 403-415.
              • Woo, C. W., Koban, L., Kross, E., Lindquist, M. A., Banich, M. T., Ruzic, L., ... & Wager, T. D. (2014). Separate neural representations for physical pain and social rejection. Nature communications5.
              • Khan, S. A., Keaser, M. L., Meiller, T. F., & Seminowicz, D. A. (2014). Altered structure and function in the hippocampus and medial prefrontal cortex in patients with burning mouth syndrome. PAIN®155(8), 1472-1480.
              • Zuo, X. N., Anderson, J. S., Bellec, P., Birn, R. M., Biswal, B. B., Blautzik, J., ... & Lurie, D. (2014). An open science resource for establishing reliability and reproducibility in functional connectomics. Scientific data1.
              • Crone, J. S., Soddu, A., Höller, Y., Vanhaudenhuyse, A., Schurz, M., Bergmann, J., ... & Kronbichler, M. (2014). Altered network properties of the fronto-parietal network and the thalamus in impaired consciousness.NeuroImage: Clinical4, 240-248.
              • Beaty, R. E., Benedek, M., Wilkins, R. W., Jauk, E., Fink, A., Silvia, P. J., ... & Neubauer, A. C. (2014). Creativity and the default network: A functional connectivity analysis of the creative brain at rest. Neuropsychologia64, 92-98.
              • Fox, M. D., Buckner, R. L., Liu, H., Chakravarty, M. M., Lozano, A. M., & Pascual-Leone, A. (2014). Resting-state networks link invasive and noninvasive brain stimulation across diverse psychiatric and neurological diseases.Proceedings of the National Academy of Sciences111(41), E4367-E4375.
              • Hosseini, S. M., & Kesler, S. R. (2014). Multivariate pattern analysis of fMRI in breast cancer survivors and healthy women. Journal of the International Neuropsychological Society20(04), 391-401.
              • Abdelnour, F., Voss, H. U., & Raj, A. (2014). Network diffusion accurately models the relationship between structural and functional brain connectivity networks. Neuroimage90, 335-347.
              • Norton, E. S., Black, J. M., Stanley, L. M., Tanaka, H., Gabrieli, J. D., Sawyer, C., & Hoeft, F. (2014). Functional neuroanatomical evidence for the double-deficit hypothesis of developmental dyslexia. Neuropsychologia61, 235-246.
              • Muller, A. M., & Meyer, M. (2014). Language in the brain at rest: new insights from resting state data and graph theoretical analysis. Frontiers in human neuroscience8.
              • Moayedi, M., Salomons, T. V., Dunlop, K. A., Downar, J., & Davis, K. D. (2014). Connectivity-based parcellation of the human frontal polar cortex. Brain Structure and Function, 1-14.
              • Schurz, M., Wimmer, H., Richlan, F., Ludersdorfer, P., Klackl, J., & Kronbichler, M. (2014). Resting-state and task-based functional brain connectivity in developmental dyslexia. Cerebral Cortex, bhu184.
              • Fischer, A. S., Whitfield-Gabrieli, S., Roth, R. M., Brunette, M. F., & Green, A. I. (2014). Impaired functional connectivity of brain reward circuitry in patients with schizophrenia and cannabis use disorder: Effects of cannabis and THC.Schizophrenia research158(1), 176-182.
              • Martin, A. K., Robinson, G., Reutens, D., & Mowry, B. (2014). Copy number deletion burden is associated with cognitive, structural, and resting-state network differences in patients with schizophrenia. Behavioural brain research,272, 324-334.
              • Husain, F. T., Carpenter-Thompson, J. R., & Schmidt, S. A. (2014). The effect of mild-to-moderate hearing loss on auditory and emotion processing networks.Frontiers in systems neuroscience8.
              • Blank, I., Kanwisher, N., & Fedorenko, E. (2014). A functional dissociation between language and multiple-demand systems revealed in patterns of BOLD signal fluctuations. Journal of neurophysiology112(5), 1105-1118.
              • Steininger, S. C., Liu, X., Gietl, A., Wyss, M., Schreiner, S., Gruber, E., ... & Unschuld, P. G. (2014). Cortical amyloid beta in cognitively normal elderly adults is associated with decreased network efficiency within the cerebro-cerebellar system. Frontiers in aging neuroscience6.
              • Ciaramidaro, A., Bölte, S., Schlitt, S., Hainz, D., Poustka, F., Weber, B., ... & Walter, H. (2014). Schizophrenia and autism as contrasting minds: neural evidence for the hypo-hyper-intentionality hypothesis. Schizophrenia bulletin, sbu124.
              • Müller-Oehring, E. M., Jung, Y. C., Pfefferbaum, A., Sullivan, E. V., & Schulte, T. (2014). The resting brain of alcoholics. Cerebral cortex, bhu134.
              • Gerretsen, P., Menon, M., Mamo, D. C., Fervaha, G., Remington, G., Pollock, B. G., & Graff-Guerrero, A. (2014). Impaired insight into illness and cognitive insight in schizophrenia spectrum disorders: Resting state functional connectivity. Schizophrenia research160(1), 43-50.
              • Flodin, P., Martinsen, S., Löfgren, M., Bileviciute-Ljungar, I., Kosek, E., & Fransson, P. (2014). Fibromyalgia is associated with decreased connectivity between pain-and sensorimotor brain areas. Brain connectivity4(8), 587-594.
              • Iaria, G., Arnold, A. E., Burles, F., Liu, I., Slone, E., Barclay, S., ... & Levy, R. M. (2014). Developmental topographical disorientation and decreased hippocampal functional connectivity. Hippocampus24(11), 1364-1374.
              • Klumpp, H., Keutmann, M. K., Fitzgerald, D. A., Shankman, S. A., & Phan, K. L. (2014). Resting state amygdala-prefrontal connectivity predicts symptom change after cognitive behavioral therapy in generalized social anxiety disorder.Biology of mood & anxiety disorders4(1), 1-7.
              • Medaglia, J. D., McAleavey, A. A., Rostami, S., Slocomb, J., & Hillary, F. G. (2014). Modeling distinct imaging hemodynamics early after TBI: the relationship between signal amplitude and connectivity. Brain imaging and behavior9(2), 285-301.
              • Jung, W. H., Jang, J. H., Park, J. W., Kim, E., Goo, E. H., Im, O. S., & Kwon, J. S. (2014). Unravelling the Intrinsic Functional Organization of the Human Striatum: A Parcellation and Connectivity Study Based on Resting-State fMRI.PLoS ONE9(9).
              • Gorka, S. M., Fitzgerald, D. A., de Wit, H., Angstadt, M., & Phan, K. L. (2014). Opioid modulation of resting-state anterior cingulate cortex functional connectivity. Journal of Psychopharmacology, 0269881114548436.
              • Kollndorfer, K., Kowalczyk, K., Hoche, E., Mueller, C. A., Pollak, M., Trattnig, S., & Schöpf, V. (2014). Recovery of Olfactory Function Induces Neuroplasticity Effects in Patients with Smell Loss. Neural plasticity2014.
              • Raschle, N. M., Smith, S. A., Zuk, J., Dauvermann, M. R., Figuccio, M. J., & Gaab, N. (2014). Investigating the Neural Correlates of Voice versus Speech-Sound Directed Information in Pre-School Children. PloS one9(12), e115549.
              • Gregory, M. D., Agam, Y., Selvadurai, C., Nagy, A., Vangel, M., Tucker, M., ... & Manoach, D. S. (2014). Resting state connectivity immediately following learning correlates with subsequent sleep-dependent enhancement of motor task performance. NeuroImage102, 666-673.
              • Gay, C. W., Robinson, M. E., George, S. Z., Perlstein, W. M., & Bishop, M. D. (2014). Immediate Changes After Manual Therapy in Resting-State Functional Connectivity as Measured by Functional Magnetic Resonance Imaging in Participants With Induced Low Back Pain. Journal of manipulative and physiological therapeutics37(9), 614-627.
              • Goparaju, B., Rana, K. D., Calabro, F. J., & Vaina, L. M. (2014). A computational study of whole-brain connectivity in resting state and task fMRI.Medical science monitor: international medical journal of experimental and clinical research20, 1024.
              • Posner, J., Siciliano, F., Wang, Z., Liu, J., Sonuga-Barke, E., & Greenhill, L. (2014). A multimodal MRI study of the hippocampus in medication-naive children with ADHD: What connects ADHD and depression?. Psychiatry Research: Neuroimaging224(2), 112-118.

            2015

                • Haag, L. M., Heba, S., Lenz, M., Glaubitz, B., Höffken, O., Kalisch, T., ... & Schmidt-Wilcke, T. (2015). Resting BOLD fluctuations in the primary somatosensory cortex correlate with tactile acuity. Cortex64, 20-28.
                • Burke Quinlan, E., Dodakian, L., See, J., McKenzie, A., Le, V., Wojnowicz, M., ... & Cramer, S. C. (2015). Neural function, injury, and stroke subtype predict treatment gains after stroke. Annals of neurology77(1), 132-145.
                • Gabitov, E., Manor, D., & Karni, A. (2015). Patterns of Modulation in the Activity and Connectivity of Motor Cortex during the Repeated Generation of Movement Sequences. Journal of cognitive neuroscience.
                • Hubbard, C. S., Khan, S. A., Keaser, M. L., Mathur, V. A., Goyal, M., & Seminowicz, D. A. (2014). Altered Brain Structure and Function Correlate with Disease Severity and Pain Catastrophizing in Migraine Patients. eNeuro1(1), e20-14.
                • Chaminade, T., Da Fonseca, D., Rosset, D., Cheng, G., & Deruelle, C. (2015). Atypical modulation of hypothalamic activity by social context in ASD. Research in Autism Spectrum Disorders10, 41-50.
                • Fani, N., King, T. Z., Brewster, R., Srivastava, A., Stevens, J. S., Glover, E. M., ... & Jovanovic, T. (2015). Fear-potentiated startle during extinction is associated with white matter microstructure and functional connectivity. Cortex,64, 249-259.
                • Jansen, J. M., Holst, R. J., Brink, W., Veltman, D. J., Caan, M. W., & Goudriaan, A. E. (2015). Brain function during cognitive flexibility and white matter integrity in alcohol‐dependent patients, problematic drinkers and healthy controls. Addiction biology.
                • Keller, J. B., Hedden, T., Thompson, T. W., Anteraper, S. A., Gabrieli, J. D., & Whitfield-Gabrieli, S. (2015). Resting-state anticorrelations between medial and lateral prefrontal cortex: association with working memory, aging, and individual differences. Cortex64, 271-280.
                • Horowitz-Kraus, T., Grainger, M., DiFrancesco, M., Vannest, J., Holland, S. K., & CMIND Authorship Consortium. (2015). Right is not always wrong: DTI and fMRI evidence for the reliance of reading comprehension on language-comprehension networks in the right hemisphere. Brain imaging and behavior,9(1), 19-31.
                • Viswanath, H., Velasquez, K. M., Savjani, R., Molfese, D. L., Curtis, K., Molfese, P. J., ... & Salas, R. (2015). Interhemispheric insular and inferior frontal connectivity are associated with substance abuse in a psychiatric population. Neuropharmacology92, 63-68.
                • Pamplona, G. S., Neto, G. S. S., Rosset, S. R., Rogers, B. P., & Salmon, C. E. (2015). Analyzing the association between functional connectivity of the brain and intellectual performance. Frontiers in human neuroscience9.
                • Leung, M. K., Chan, C. C., Yin, J., Lee, C. F., So, K. F., & Lee, T. M. (2015). Enhanced amygdala–cortical functional connectivity in meditators.Neuroscience letters590, 106-110.
                • Avants, B. B., Duda, J. T., Kilroy, E., Krasileva, K., Jann, K., Kandel, B. T., ... & Wang, D. J. (2015). The pediatric template of brain perfusion. Scientific data2.
                • Čeko, M., Shir, Y., Ouellet, J. A., Ware, M. A., Stone, L. S., & Seminowicz, D. A. (2015). Partial recovery of abnormal insula and dorsolateral prefrontal connectivity to cognitive networks in chronic low back pain after treatment.Human brain mapping36(6), 2075-2092.
                • Horowitz-Kraus, T., & Holland, S. K. (2015). Greater functional connectivity between reading and error-detection regions following training with the reading acceleration program in children with reading difficulties. Annals of dyslexia,65(1), 1-23.
                • Viswanath, H., Velasquez, K. M., Thompson-Lake, D. G. Y., Savjani, R., Carter, A. Q., Eagleman, D., ... & De La Garza, R. (2015). Alterations in interhemispheric functional and anatomical connectivity are associated with tobacco smoking in humans. Frontiers in human neuroscience9.
                • Patel, M. J., Andreescu, C., Price, J. C., Edelman, K. L., Reynolds, C. F., & Aizenstein, H. J. (2015). Machine learning approaches for integrating clinical and imaging features in late‐life depression classification and response prediction. International journal of geriatric psychiatry.
                • Vega, J. N., Hohman, T. J., Pryweller, J. R., Dykens, E. M., & Thornton-Wells, T. A. (2015). Resting-State Functional Connectivity in Individuals with Down Syndrome and Williams Syndrome Compared with Typically Developing Controls. Brain connectivity.
                • Xiao, Y., Zhai, H., Friederici, A. D., & Jia, F. (2015). The development of the intrinsic functional connectivity of default network subsystems from age 3 to 5.Brain imaging and behavior, 1-10.
                • Buades-Rotger, M., Brunnlieb, C., Münte, T. F., Heldmann, M., & Krämer, U. M. (2015). Winning is not enough: ventral striatum connectivity during physical aggression. Brain imaging and behavior, 1-10.
                • Kovács, B., & Kéri, S. (2015). Off-label intranasal oxytocin use in adults is associated with increased amygdala-cingulate resting-state connectivity.European Psychiatry.
                • Smith, R., Allen, J. J., Thayer, J. F., & Lane, R. D. (2015). Altered functional connectivity between medial prefrontal cortex and the inferior brainstem in major depression during appraisal of subjective emotional responses: A preliminary study. Biological psychology108, 13-24.
                • Smith‐Collins, A. P., Luyt, K., Heep, A., & Kauppinen, R. A. (2015). High frequency functional brain networks in neonates revealed by rapid acquisition resting state fMRI. Human brain mapping.
                • Watanabe, T., Hanajima, R., Shirota, Y., Tsutsumi, R., Shimizu, T., Hayashi, T., ... & Konishi, S. (2015). Effects of rTMS of Pre-Supplementary Motor Area on Fronto Basal Ganglia Network Activity during Stop-Signal Task. The Journal of Neuroscience35(12), 4813-4823.
                • Yassi, N., Malpas, C. B., Campbell, B. C., Moffat, B., Steward, C., Parsons, M. W., ... & Bivard, A. (2015). Contralesional Thalamic Surface Atrophy and Functional Disconnection 3 Months after Ischemic Stroke. Cerebrovascular Diseases39(3-4), 232-241.
                • Mascali, D., DiNuzzo, M., Gili, T., Moraschi, M., Fratini, M., Maraviglia, B., ... & Giove, F. (2015). Intrinsic Patterns of Coupling between Correlation and Amplitude of Low-Frequency fMRI Fluctuations Are Disrupted in Degenerative Dementia Mainly due to Functional Disconnection. PLoS One10(4).
                • Stout, D., Hecht, E., Khreisheh, N., Bradley, B., & Chaminade, T. (2015). Cognitive Demands of Lower Paleolithic Toolmaking. PLoS ONE10(4), e0121804.
                • Alba-Ferrara, L., Müller-Oehring, E. M., Sullivan, E. V., Pfefferbaum, A., & Schulte, T. (2015). Brain responses to emotional salience and reward in alcohol use disorder. Brain imaging and behavior, 1-11.
                • Thurston, R. C., Maki, P. M., Derby, C. A., Sejdić, E., & Aizenstein, H. J. (2015). Menopausal hot flashes and the default mode network. Fertility and sterility.
                • Cui, Z., Zhao, C., & Gong, G. (2015). Parallel workflow tools to facilitate human brain MRI post-processing. Frontiers in Neuroscience9.
                • Lin, H. Y., Tseng, W. Y. I., Lai, M. C., Matsuo, K., & Gau, S. S. F. (2015). Altered Resting-State Frontoparietal Control Network in Children with Attention-Deficit/Hyperactivity Disorder. Journal of the International Neuropsychological Society21, 1-14.
                • Hampson, J. P., Zick, S. M., Khabir, T., Wright, B. D., & Harris, R. E. (2015). Altered resting brain connectivity in persistent cancer related fatigue.NeuroImage: Clinical8, 305-313.
                • Stoeckel, L. E., Chai, X. J., Zhang, J., Whitfield‐Gabrieli, S., & Evins, A. E. (2015). Lower gray matter density and functional connectivity in the anterior insula in smokers compared with never smokers. Addiction biology.
                • Ghisleni, C., Bollmann, S., Poil, S. S., Brandeis, D., Martin, E., Michels, L., ... & Klaver, P. (2015). Subcortical Glutamate Mediates the Reduction of Short-Range Functional Connectivity with Age in a Developmental Cohort. The Journal of Neuroscience35(22), 8433-8441.
                • Taren, A. A., Gianaros, P. J., Greco, C. M., Lindsay, E. K., Fairgrieve, A., Brown, K. W., ... & Creswell, J. D. (2015). Mindfulness meditation training alters stress-related amygdala resting state functional connectivity: a randomized controlled trial. Social cognitive and affective neuroscience, nsv066.
                • Maass, A., Berron, D., Libby, L. A., Ranganath, C., & Düzel, E. (2015). Functional subregions of the human entorhinal cortex. eLife4, e06426.
                • Kornfeld, S., Rodríguez, J. A. D., Everts, R., Kaelin-Lang, A., Wiest, R., Weisstanner, C., ... & Grunt, S. (2015). Cortical reorganisation of cerebral networks after childhood stroke: impact on outcome. BMC neurology15(1), 90.
                • McHugo, M., Rogers, B. P., Talati, P., Woodward, N. D., & Heckers, S. (2015). increased amplitude of low frequency fluctuations but normal hippocampal-default mode network connectivity in schizophrenia. Frontiers in psychiatry6.
                • Heine, L., Bahri, M. A., Cavaliere, C., Soddu, A., Laureys, S., Ptito, M., & Kupers, R. (2015). Prevalence of increases in functional connectivity in visual, somatosensory and language areas in congenital blindness. Frontiers in neuroanatomy9.
                • Wang, J., Wang, X., Xia, M., Liao, X., Evans, A., & He, Y. (2015). GRETNA: a graph theoretical network analysis toolbox for imaging connectomics. Frontiers in human neuroscience9.
                • Cao, B., Zhan, L., Kong, X., Philip, S. Y., Vizueta, N., Altshuler, L. L., & Leow, A. D. (2015). Identification of Discriminative Subgraph Patterns in fMRI Brain Networks in Bipolar Affective Disorder. In Brain Informatics and Health (pp. 105-114). Springer International Publishing.
                • Igelström, K. M., Webb, T. W., & Graziano, M. S. (2015). Neural processes in the human temporoparietal cortex separated by localized independent component analysis. The Journal of Neuroscience35(25), 9432-9445.
                • Thompson, W. H., & Fransson, P. (2015). The mean–variance relationship reveals two possible strategies for dynamic brain connectivity analysis in fMRI.Frontiers in human neuroscience9.
                • Demertzi, A., Antonopoulos, G., Heine, L., Voss, H. U., Crone, J. S., de Los Angeles, C., ... & Laureys, S. (2015). Intrinsic functional connectivity differentiates minimally conscious from unresponsive patients. Brain, awv169.
                • Carpenter-Thompson, J. R., Schmidt, S. A., & Husain, F. T. (2015). Neural Plasticity of Mild Tinnitus: An fMRI Investigation Comparing Those Recently Diagnosed with Tinnitus to Those That Had Tinnitus for a Long Period of Time.Neural plasticity2015.
                • Woodward, N. D., & Heckers, S. (2015). Mapping thalamocortical functional connectivity in chronic and early stages of psychotic disorders. Biological Psychiatry.
                • Sours, C., George, E. O., Zhuo, J., Roys, S., & Gullapalli, R. P. (2015). Hyper-connectivity of the thalamus during early stages following mild traumatic brain injury. Brain imaging and behavior9(3), 550-563.
                • Bernard, C., Dilharreguy, B., Helmer, C., Chanraud, S., Amieva, H., Dartigues, J. F., ... & Catheline, G. (2015). PCC characteristics at rest in 10-year memory decliners. Neurobiology of aging36(10), 2812-2820.
                • Ryan, J. P., Aizenstein, H. J., Orchard, T. J., Ryan, C. M., Saxton, J. A., Fine, D. F., ... & Rosano, C. (2015). Age of childhood onset in Type 1 diabetes and functional brain connectivity in midlife. Psychosomatic medicine77(6), 622-630.
                • Minami, S. B., Oishi, N., Watabe, T., Uno, K., Kaga, K., & Ogawa, K. (2015). Auditory resting-state functional connectivity in tinnitus and modulation with transcranial direct current stimulation. Acta oto-laryngologica, 1-7.
                • Grimm, O., Gass, N., Weber-Fahr, W., Sartorius, A., Schenker, E., Spedding, M., ... & Meyer-Lindenberg, A. (2015). Acute ketamine challenge increases resting state prefrontal-hippocampal connectivity in both humans and rats.Psychopharmacology, 1-11.
                • Beltrachini, L., Marco, M. D., A Taylor, Z., Lotjonen, J., F Frangi, A., & Venneri, A. (2015). Integration of Cognitive Tests and Resting State fMRI for the Individual Identification of Mild Cognitive Impairment. Current Alzheimer Research12(6), 592-603.
                • Horowitz-Kraus, T., Toro-Serey, C., & DiFrancesco, M. (2015). Increased Resting-State Functional Connectivity in the Cingulo-Opercular Cognitive-Control Network after Intervention in Children with Reading Difficulties. PloS one10(7), e0133762.
                • Adnan, A., Barnett, A., Moayedi, M., McCormick, C., Cohn, M., & McAndrews, M. P. (2015). Distinct hippocampal functional networks revealed by tractography-based parcellation. Brain Structure and Function, 1-14.
                • Di Perri, C., Bahri, M. A., Amico, E., Thibaut, A., Bruno, M. A., Demertzi, A., ... & Laureys, S. (2015). The neural correlates of consciousness recovery: a multimodal neuroimaging study.
                • Vatansever, D., Menon, D. K., Manktelow, A. E., Sahakian, B. J., & Stamatakis, E. A. (2015). Default mode network connectivity during task execution.NeuroImage122, 96-104.
                • Pelletier-Baldelli, A., Bernard, J. A., & Mittal, V. A. (2015). Intrinsic Functional Connectivity in Salience and Default Mode Networks and Aberrant Social Processes in Youth at Ultra-High Risk for Psychosis. PloS one10(8), e0134936.
                • Boes, A. D., Prasad, S., Liu, H., Liu, Q., Pascual-Leone, A., Caviness, V. S., & Fox, M. D. (2015). Network localization of neurological symptoms from focal brain lesions. Brain, awv228.
                • Whitfield-Gabrieli, S., S. S. Ghosh, A. Nieto-Castanon, Z. Saygin, O. Doehrmann, X. J. Chai, G. O. Reynolds, S. G. Hofmann, M. H. Pollack, and J. D. E. Gabrieli. (2015). Brain connectomics predict response to treatment in social anxiety disorder. Molecular psychiatry.
                • Flodin, P., Martinsen, S., Mannerkorpi, K., Löfgren, M., Bileviciute-Ljungar, I., Kosek, E., & Fransson, P. (2015). Normalization of aberrant resting state functional connectivity in fibromyalgia patients following a three month physical exercise therapy. NeuroImage: Clinical9, 134-139.
                • Darbari, D. S., Hampson, J. P., Ichesco, E., Kadom, N., Vezina, G., Evangelou, I., ... & Harris, R. E. (2015). Frequency of hospitalizations for pain and association with altered brain network connectivity in sickle cell disease. The Journal of Pain.
                • Solstrand Dahlberg, L. (2015). Assessment of Function, Structure and Working Memory in Adolescents with a Recent Diagnosis of an Eating Disorder.
                • Bharath, R. D., Sinha, S., Panda, R., Raghavendra, K., George, L., Chaitanya, G., ... & Satishchandra, P. (2015). Seizure Frequency Can Alter Brain Connectivity: Evidence from Resting-State fMRI. American Journal of Neuroradiology.
                • Muehlhan, M., Kirschbaum, C., Wittchen, H. U., & Alexander, N. (2015). Epigenetic variation in the serotonin transporter gene predicts resting state functional connectivity strength within the salience‐network. Human brain mapping.
                • Alaerts, K., Geerlings, F., Herremans, L., Swinnen, S. P., Verhoeven, J., Sunaert, S., & Wenderoth, N. (2015). Functional Organization of the Action Observation Network in Autism: A Graph Theory Approach. PloS one10(8), e0137020.
                • Khan, H. S., & Stroman, P. W. (2015). Inter-individual differences in pain processing investigated by functional magnetic resonance imaging of the brainstem and spinal cord. Neuroscience307, 231-241.
                • Robinson, J. L., Barron, D. S., Kirby, L. A., Bottenhorn, K. L., Hill, A. C., Murphy, J. E., ... & Fox, P. T. (2015). Neurofunctional topography of the human hippocampus. Human brain mapping.
                • Demirakca, T., Cardinale, V., Dehn, S., Ruf, M., & Ende, G. The exercising brain–changes in functional connectivity induced by an integrated multimodal cognitive and whole body motor coordination training.
                • Lin, H. Y., & Gau, S. S. F. (2015). Atomoxetine treatment strengthens an anti-correlated relationship between functional brain networks in medication-naïve adults with attention-deficit hyperactivity disorder: a randomized double-blind placebo-controlled clinical trial. International Journal of Neuropsychopharmacology, pyv094.
                • Weinstein, J. J., Rogers, B. P., Taylor, W. D., Boyd, B. D., Cowan, R. L., Shelton, K. M., & Salomon, R. M. (2015). Effects of acute tryptophan depletion on raphé functional connectivity in depression. Psychiatry Research: Neuroimaging.
                • Sandberg, C. W., Bohland, J. W., & Kiran, S. (2015). Changes in functional connectivity related to direct training and generalization effects of a word finding treatment in chronic aphasia. Brain and language150, 103-116.
                • Bernard, J. A., Orr, J. M., & Mittal, V. A. (2015). Differential Motor and Prefrontal Cerebello-Cortical Network Development: Evidence from Multimodal Neuroimaging. NeuroImage.
                • Demirakca, T., Cardinale, V., Dehn, S., Ruf, M., & Ende, G. (2015). The Exercising Brain: Changes in Functional Connectivity Induced by an Integrated Multimodal Cognitive and Whole-Body Coordination Training. Neural Plasticity,501, 204592.
                • Kollndorfer, K., Jakab, A., Mueller, C. A., Trattnig, S., & Schöpf, V. (2015). Effects of chronic peripheral olfactory loss on functional brain networks.Neuroscience.
                • McKenna, F., Koo, B. B., Killiany, R., & Alzheimer’s Disease Neuroimaging Initiative. (2015). Comparison of ApoE-related brain connectivity differences in early MCI and normal aging populations: an fMRI study. Brain imaging and behavior, 1-14.
                • Demirakca, T., Cardinale, V., Dehn, S., Ruf, M., & Ende, G. (2015). The Exercising Brain: Changes in Functional Connectivity Induced by an Integrated Multimodal Cognitive and Whole-Body Coordination Training. Neural Plasticity,501, 204592.
                • Denier, N., Schmidt, A., Gerber, H., Vogel, M., Huber, C. G., Lang, U. E., ... & Borgwardt, S. (2015). Abnormal functional integration of thalamic low frequency oscillation in the BOLD signal after acute heroin treatment. Human Brain Mapping.
                • Gabitov, E., Manor, D., & Karni, A. (2015). Learning from the other limb's experience: Sharing the “Trained” M1's representation of the motor sequence knowledge. The Journal of physiology.
                • Malpas, C. B., Genc, S., Saling, M. M., Velakoulis, D., Desmond, P. M., & O’Brien, T. J. (2015). MRI correlates of general intelligence in neurotypical adults. Journal of Clinical Neuroscience.
                • Geiger, M. J., Domschke, K., Ipser, J., Hattingh, C., Baldwin, D. S., Lochner, C., & Stein, D. J. (2015). Altered executive control network resting-state connectivity in social anxiety disorder. The World Journal of Biological Psychiatry, 1-11.
                • Baldwin, P. R., Curtis, K. N., Patriquin, M. A., Wolf, V., Viswanath, H., Shaw, C., ... & Salas, R. (2015). Identifying diagnostically‐relevant resting state brain functional connectivity in the ventral posterior complex via genetic data mining in autism spectrum disorder. Autism Research.

               


               
               
               
              [1] This is a non-exhaustive list to help new users find examples of analyses using the conn toolbox
               Please help us keep this list up to date by sending us an e-mail if you are a conn toolbox user and would like to see your article listed here